I filed married filing jointly. My accountant checked number 3) married US national on April 2005. I told him to check other married nonresident alien,but he said no. My wife has a J2 visa. Now, IRS insists that I should file married filing separately. IRS required me to pay much more taxes with penalities and interests. I called IRS tens of times. Sometimes,they say that they will process the return again, some of the IRS who answered the phone say that I should make amendment. Some say that I can not file marrying jointly because I am a nonresident alien.
Also, I send my return on time. At first,they said that they did not receive it. Then, I send another one after five months. After 7 months, they said that they found the first one and told me that they will waive penality for late filing. After one more month, they said that they lost the return again and I should pay the penality.
My accountant decided to leave me as he is confused. he said that they will do nothing for me.
What should I do?